2017
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A non-canonical RNA degradation pathway suppresses RNAi-dependent epimutations in the human fungal pathogen
Mucor circinelloides Calo S,
Nicolás FE, Lee SC, Vila A, Cervantes M,
Torres-Martinez S,
Ruiz-Vazquez RM, Cardenas ME, Heitman J PLoS Genet. 2017; 13(3):e1006686 (doi: 10.1371/journal.pgen.1006686)
[PubMed] [Article]
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RNAi-based functional genomics identifies new virulence determinants in mucormycosis
Trieu TA,
Navarro-Mendoza MI,
Pérez-Arques C, Sanchis M, Capilla J, Navarro-Rodriguez P, Lopez-Fernandez L,
Torres-Martínez S,
Garre V,
Ruiz-Vázquez RM,
Nicolás FE PLoS Pathog. 2017; 13(1):e1006150 (doi: 10.1371/journal.ppat.1006150)
[PubMed] [PubMed Central] [Article]
2016
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Generation of lycopene-overproducing strains of the fungus
Mucor circinelloides reveals important aspects of lycopene formation and accumulation Zhang Y, Chen H,
Navarro E,
López-García S, Chen YQ, Zhang H, Chen W,
Garre V Biotechnol Lett. 2016; 39(3):439-446 (doi: 10.1007/s10529-016-2265-2)
[PubMed] [Article]
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Expansion of signal transduction pathways in Fungi by extensive genome duplication Corrochano LM, Kuo A, Marcet-Houben M,
Polaino S, Salamov A, Villalobos-Escobedo JM, Grimwood J, Álvarez MI, Avalos J, Bauer D, Benito EP, Benoit I, Burger G, Camino LP, Cánovas D, Cerdá-Olmedo E, Cheng JF, Domínguez A, Eliáš M, Eslava AP, Glaser F, Gutiérrez G, Heitman J, Henrissat B, Iturriaga EA, Lang BF, Lavín JL, Lee SC, Li W, Lindquist E,
López-García S, Luque EM, Marcos AT, Martin J, McCluskey K, Medina HR, Miralles-Durán A, Miyazaki A, Muñoz-Torres E, Oguiza JA, Ohm RA, Olmedo M, Orejas M, Ortiz-Castellanos L, Pisabarro AG, Rodríguez-Romero J, Ruiz-Herrera J,
Ruiz-Vázquez RM, Sanz C, Schackwitz W, Shahriari M, Shelest E, Silva-Franco F, Soanes D, Syed K, Tagua VG, Talbot NJ, Thon MR, Tice H, de Vries RP, Wiebenga A, Yadav JS, Braun EL, Baker SE,
Garre V, Schmutz J, Horwitz BA,
Torres-Martínez S, Idnurm A, Herrera-Estrella A, Gabaldón T, Grigoriev IV Curr Biol. 2016; 26(12):1577-1584 (doi: 10.1016/j.cub.2016.04.038)
[PubMed] [Article]
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Role of malate transporter in lipid accumulation of oleaginous fungus
Mucor circinelloides Zhao L,
Cánovas-Márquez JT, Tang X, Chen H, Chen YQ, Chen W,
Garre V, Song Y, Ratledge C Appl Microbiol Biotechnol. 2016; 100(3):1297-1305 (doi: 10.1007/s00253-015-7079-y)
[PubMed] [Article]
2015
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Distinct RNAi pathways in the regulation of physiology and development in the fungus
Mucor circinelloides Ruiz-Vázquez RM,
Nicolás FE,
Torres-Martínez S,
Garre V Adv Genet. 2015; 91:55-102 (doi: 10.1016/bs.adgen.2015.07.002)
[PubMed] [Review]
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Comparison of biochemical activities between high and low lipid-producing strains of
Mucor circinelloides: an explanation for the high oleaginicity of strain WJ11 Tang X, Chen H, Chen YQ, Chen W,
Garre V, Song Y, Ratledge C PLoS One. 2015; 10(6):e0128396 (doi: 10.1371/journal.pone.0128396)
[PubMed] [PubMed Central] [Article]
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Transformation of
Mucor circinelloides f.
lusitanicus protoplasts
Garre V, Barredo JL, Iturriaga EA Genetic Transformation Systems in Fungi. 2015; 1:49-60 (doi: 10.1007/978-3-319-10142-2_4)
[Book Section]
2014
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Antifungal drug resistance evoked via RNAi-dependent epimutations Calo S, Shertz-Wall C, Lee SC, Bastidas RJ,
Nicolás FE, Granek JA, Mieczkowski P,
Torres-Martínez S,
Ruiz-Vázquez RM, Cardenas ME, Heitman J Nature. 2014; 513(7519):555-558 (doi: 10.1038/nature13575)
[PubMed] [PubMed Central] [Article]
2013
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Malic enzyme activity is not the only bottleneck for lipid accumulation in the oleaginous fungus
Mucor circinelloides Rodríguez-Frómeta RA,
Gutiérrez A,
Torres-Martínez S,
Garre V Appl Microbiol Biotechnol. 2013; 97(7):3063-3072 (doi: 10.1007/s00253-012-4432-2)
[PubMed] [Article]
2012
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Protein kinase A regulatory subunit isoforms regulate growth and differentiation in
Mucor circinelloides: essential role of PKAR4 Ocampo J, McCormack B,
Navarro E, Moreno S,
Garre V, Rossi S Eukaryot Cell. 2012; 11(8):989-1002 (doi: 10.1128/EC.00017-12)
[PubMed] [PubMed Central] [Article]
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Biogenesis of Y RNA-derived small RNAs is independent of the microRNA pathway
Nicolas FE, Hall AE, Csorba T, Turnbull C, Dalmay T FEBS Lett. 2012; 586(8):1226-1230 (doi: 10.1016/j.febslet.2012.03.026)
[PubMed] [Article]
2011
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Bioengineering RNA silencing across the life kingdoms Alvarez-Fernandez R, Lopez-Gomollon S, Lopez-Martinez AF,
Nicolas FE Recent Pat Biotechnol. 2011; 5(2):118-146
[PubMed] [Article]
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Experimental validation of microRNA targets using a luciferase reporter system
Nicolas FE Methods Mol Biol. 2011; 732:139-152 (doi: 10.1007/978-1-61779-083-6_11)
[PubMed] [Book Section]
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Silencing human cancer: identification and uses of microRNAs
Nicolas FE, Lopez-Gomollon S, Lopez-Martinez AF, Dalmay T Recent Pat Anticancer Drug Discov. 2011; 6(1):94-105
[PubMed] [Review]
2010
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Analyzing mRNA expression identifies Smad3 as a microRNA-140 target regulated only at protein level Pais H,
Nicolas FE, Soond SM, Swingler TE, Clark IM, Chantry A, Moulton V, Dalmay T RNA. 2010; 16(3):489-94 (doi: 10.1261/rna.1701210)
[PubMed] [PubMed Central] [Article]
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Photobiology in the Zygomycota: multiple photoreceptor genes for complex responses to light Corrochano LM,
Garre V Fungal Genet Biol. 2010; 47(11):893-899 (doi: 10.1016/j.fgb.2010.04.007)
[PubMed] [Review]
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Direct transformation of fungal biomass from submerged cultures into biodiesel Vicente V, Bautista LF, Gutiérrez FJ, Rodríguez R, Martínez V, Rodríguez-Frómeta RA,
Ruiz-Vázquez RM,
Torres-Martínez S,
Garre V Energy & Fuels. 2010; 24(5):3173-3178 (doi: 10.1021/ef9015872)
[Article]
2009
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RNA silencing: Recent developments on miRNAs
Nicolas FE, Lopez-Gomollon S, Lopez-Martinez AF, Dalmay T Recent Pat DNA Gene Seq. 2009; 3(2):77-87
[PubMed] [Review]
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A subunit of protein kinase a regulates growth and differentiation in the fungus
Mucor circinelloides Ocampo J, Fernandez Nuñez L, Silva F, Pereyra E, Moreno S,
Garre V, Rossi S Eukaryot Cell. 2009; 8(7):933-944 (doi: 10.1128/EC.00026-09). Erratum in: Eukaryot Cell. 2012; 11(7):963
[PubMed] [PubMed Central] [Article]
2008
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Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140
Nicolas FE, Pais H, Schwach F, Lindow M, Kauppinen S, Moulton V, Dalmay T RNA. 2008; 14(12):2513-2520 (doi: 10.1261/rna.1221108)
[PubMed] [PubMed Central] [Article]
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A RING-finger protein regulates carotenogenesis via proteolysis-independent ubiquitylation of a white collar-1-like activator Silva F,
Navarro E, Peñaranda A, Murcia-Flores L,
Torres-Martínez S,
Garre V Mol Microbiol. 2008; 70(4):1026-1036 (doi: 10.1111/j.1365-2958.2008.06470.x)
[PubMed] [Article]
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Role of the white collar 1 photoreceptor in carotenogenesis, UV resistance, hydrophobicity, and virulence of
Fusarium oxysporum Ruiz-Roldán MC,
Garre V, Guarro J, Mariné M, Roncero MI Eukaryot Cell. 2008; 7(7):1227-1230 (doi: 10.1128/EC.00072-08)
[PubMed] [PubMed Central] [Article]
2007
2006
2005
2004
2003
cigA, a light-inducible gene involved in vegetative growth in
Mucor circinelloides is regulated by the carotenogenic repressor
crgA Quiles-Rosillo MD,
Torres-Martínez S,
Garre V Fungal Genet Biol. 2003; 38(1):122-132
[PubMed] [Article]
2001
2000
1995